CDS

Accession Number TCMCG007C00088
gbkey CDS
Protein Id XP_033138040.1
Location join(290851..290911,291040..291101,291882..291974,292369..292441,292637..292921,293000..293067,293188..293319,293409..293450,293539..294054,294138..294292,294392..294914,294991..295053,295145..295246,295341..295658,295767..295859,295959..296060,296183..296287,296366..296499,296596..296779,296878..297009,297112..297224,297345..297432,297515..299392)
Gene LOC103844641
GeneID 103844641
Organism Brassica rapa

Protein

Length 1773aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033282149.1
Definition protein TSS [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description Translation initiation factor eIF3 subunit 135
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
KEGG_ko ko:K03255        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCTCCCAAGAGCAACCGTGGAAAGACAAAAGGAGACAAGAAGAAGAAGGAAGAGAAAGTTCTTCCGGTTATGGTGGATGTCATTGTGAACCTTCCGGACGAGACGGAGGCTATTTTGAAGGGCATATCAACGGACAGGATCATAGATGTTCGTCGGCTTTTATCCGTTAACTTCGACACCTGCCATGTTACCAACTATTCTCTCTCCCATGAGGTAAGAGGATCGCAGTTAAAAGACACAGTGGATGTTTCGGCGCTTAAGCCGTGTGTTCTCACGTTAACAGAAGAGGATTACAATGAGGGAACCGCGATGGCGCACGTTAGACGGCTGCTTGACGTCGTCGCCTGTACTACTTGCTTCGGTCCGTCGCCGGAGAAATCCGATTCGGTGAAAAATGCGCAGGTTAAGGGAGGTGGAAAGAATCCCAAACAGACTGAAACGTCGCCTCCGCCGTCTCCTGCGCCGAAGGATGCGGTTGTTGATGAAGCCGGAGAGACTAGTCACTCTTTCCCTAAGCTCGGAAGCTTCTATGAGTTCTTCTCTCTCGCTCACCTCACTCCTCCTCTTCAATATATAAGGCTCGTGGCGAAGCGGGAAACTGAAGATATCGCGGCGGAAGATCATCTTCTCTCCGTCGATGTGAAGCTTTGTAACGGGAAGCTCGTTCATGTCGAAGGCTGCAGAAAAGGATTCTACAGCATCGGGAAACAAAGAATCATATGTCACAATCTTGTTGATTTGCTTAGACAAATCAGTAGAGCCTTCGATAATGCTTACAGTGATCTTCTGAAAGCATTTTCGGAGCGCAACAAGTTTGGGAATCTTCCTTACGGGTTTAGAGCAAACACATGGCTCATCCCGCCTTCTGCAGCGCAGTCACCAGCAGCGTTTCCGCCTCTCCCTGTCGAGGATGAGAGATGGGGAGGGGATGGTGGTGGTCAAGGAAGAGATGGCAGCTACGATTTGGTTCCATGGGCCAACGAATTCGCCTTTATCGCATCTATGCCTTGCAAAACAGCAGAGGAGAGGCAACTTAGAGACAGAAAAGTGTTTCTCCTTCACAACCTTTTCGTTGATGTCGCCACTTTCAGAGCCATCAAGGCTGTTCAGAAGGTAATGGCTGACCCAGTTCTGGCTGAAGACTCTCAAGTGCTGTATTCCGAGACAGTTGGAGATTTGAGTGTTACGGTTACGAGGGATACTTCCAATGCAAGTAGCAAAGTGGATACAAAAATTGATGGAATTCAAGCCACTGGTTTGGATAAAACGAAGCTGATGGAACGGAACCTTCTCAAGGGACTTACAGCTGATGAGAACACTGCTGCTCATGATGTTGCTACTTTGGGAACTATAAGCCTTAAGTATTGTGGTTACATTTCTGTTGTCAAAATAGAGAAGGAGAATGAGAAGTTGAGCCCACCTTCTCAAATTGTTGACCTCCTTGAACAGCCTGAAGGTGGTGCTAATGCTCTAAACATCAACAGTTTGAGATTCCTCCTCCATAAATCCTCTCCTGAGCAGAACAAGAAAACACATCAGCAACAGGATGATGAGCTTACATCTTCCCGAGAATTTGTAAGTAAAATGCTGGAGGAAAGTCTTGTTAAGCTTGAGGAAGAAGAGATAGACAGGGATAGTATCATGAGGTGGGAACTTGGAGCCTGTTGGATACAGCATTTACAAGATCAAAAGAATACGGAAAAGGACAAAAAACAAACCAACGAAAAGTCTAAGAATGAACTCAAGGTTGAAGGGCTTGGGAAGCCGCTTAAGTCTCTCAACAGCAACAAGAAAAAAACAGACGCAAGCAGCCCTAAGGCGCAGCAGACTGCAGTATCGTCTCAGGTTGATACGGCTTCTTCAGAGGCTGATAATGCTGCAATAACTGCAACTTTGCAATCTGACGCCGAGAAGAATGCTCAAGAAAATGTGCTTATCTTGAAGAATTTGTTGTCTGAAGCAGCCTTCACTCGTCTACAAGAGTCAGATACTGGACTTCATGACAAGTCGTTGCAAGAACTTGTCGACTTGGCACAAAAGTATTATACTGAAGTCGCTATTCCGAAGCTGGTTGCAGATTTTGGTTCGTTGGAACTCTCCCCAGTTGATGGCCGGACTCTAACTGATTTTATGCACACAAGAGGTCTTCGGATGCGCTCTTTAGGATATGTCGTTAAGCTCTCAGATAAGTTGTCACATGTACAGTCTCTGTGTGTTCATGAGATGATTGTTAGAGCCCTTAAGCATATTCTTCAGGCGGTGATTTCTGCTGTTGCTGCTGACACTGACAAAATAGCTGCAAAAGTAGCTACTGCTCTGAACATGATGCTTGGGATTCCAAAAACTGAAGCGGAAAACTCTTGGAATGTACATCCTCTTATCTTCCGGTGGTTGGAGAAATTCTTGAAGAAACGATATGACTACGATCTCAATGCCTTCAGTTACAAGGATCTACGAAAGTTTGCCATTCTCCGTGGATTATGCCATAAGGTTGGTATTGAGTTGATTCCAAGGGATTTTGACATGGAGTCCCCAGAACCGTTCCAAAAAACAGATGTGGTCAGTCTGGTCCCAGTGCATAAGCAAGCAGCATGTTCGTCTGCTGATGGAAGACAACTTCTGGAGTCATCTAAAACAGCATTAGACAAAGGAAAGCTTGAAGATGCAGTTACATATGGAACAAAGGCTCTTGCTAAGCTTGTAGCAGTTTGTGGTCCGTATCACAGAATGACAGCCGGAGCTTACAGTTTACTTGCTGTAGTTCTATATCACACTGGTGACTTTAACCAGGCTACTATATATCAGCAAAAGGCGTTAGATATCAATGAGAGGGAACTTGGACTTGATCATCCGGATACAATGAAGAGTTATGGTGATCTTGCTGTCTTCTATTATAGGCTTCAGCATACAGAGCTGGCTCTCAAGTATGTTAAGCGTGCGTTGTATCTCTTACATCTAACATGTGGTCCATCTCATCCGAACACTGCTGCTACATACATCAATGTAGCCATGATGGAGGAAGGTCTAGGAAATGTACATGTTGCCTTGAGGTATCTTCACAAAGCTCTCAAGTGTAATCAAAGGTTGCTTGGTCCTGACCATATCCAGACTGCTGCAAGCTACCATGCCATAGCCATTGCGCTCTCGTTGATGGAAGCATACCATTTAAGTGTTCAGCATGAGCAAACAACCTTAAGAATCCTCCGAGCAAAGCTGGGCCCAGATGATTTGCGTACTCAGGATGCTGCTGCTTGGCTAGAATACTTTGAGTCCAAGGCTTTTGAACAACAGGAAGCTGCAAGAAATGGTACTCCTAAGCCTGACGCGTCTATAGCCAGCAAAGGCCACCTAAGTGTATCCGATCTACTGGACTTTATCAACCCAAGCCATAACGCAAAAGGGAAACAGAGTGTGGCAGCAAAGAGGAAGAGCTATATGAAGCTAAAGGAAAAATCCAATCAGAACGTTGTTTCTGAGCAGTTAACAGAAACCCCAAGGGAAAATCAAAAGGAAATGTCTGAAGAGGAGACAGAAGCAACTGGATCAGAAGATGGTCAATCGAGCGATGCGAATCAGGAGGCAATTCTTGCACCAGCTGAAGAACCACCTTCACATCCAGTCATTGACGAGGCTATTATGGATAATAGTAATCCAACTACATCTGCTGAAGGTTCAACTGAGACACAACACCCTGATGGTAGTGAAGATGGATGGCAACCGGTGCATAGACCGAGATCTGCTGGATCATATGGTCGCCGGTTGAAGCAACGACGAGCATCAGTTGGAAAGGTATATACATATCAGAAGAAAAATGTTGAAGCTGATAATGATAACCCTGTTCTCCAGAATGCTACTCAGCCGAACGCCACATACTACGTTCTGAAGAAGCGTACAGCGTCCTATGCAAACTATGGAGATCATCATTCTCCCGGAATGACAACTCAAGGCACCAAATTTGGCAGGAAGGCAGTGAAAACCTTGGCATATCGGGTTAAATCAACGCAGCCGTCTTCTGATAACCCCAAAACTTCAGCTGAAACATCAGAAGAAGATGGGTTGAAGGCAGATGCTTCTCCTGCTGTGCCATCTGGTCTGTCTAGTAATGTGCAAAATGAGGCATACCCGAAATCCTCTGTTGTAAGTCTTGGAAAATCTCCATCCTACAAGGAAGTAGCATTGGCACCACCTGGCTCCATTGCCAAGTATCAAGTCTGGGCTCCACAAGCCGAAGCTTCAGATAAGCAAGAGGAGAAAAAATCTGAAGAGGGCACATCGGTGGAGCTGACAAGGGATGAGCAGATGATTACAGTGTCAGAGAAAGAGGTGAAAAATGAAATTTCTGCGGATGCAGAGTCTAGCAAACCTCAAGGCAAAGAAGAGATCGAAGTAGAGTTACAATCATCTGAAGTGGAATTCAAAGGGAACAATTTGAACGGAAATGAAGAATCTGGTGGGGGCATTCAGGTGGAAGAACCAGTACTTGAAGATAAGGAAGGTGTAACAGATATGATTCATTCCAACACAGAGCAAGAAGTGAAAGATCAGCTGGCCGCTGATTCCGATGATCTGAAGGAAAAACTGGGAATCTCTGCTACAGACTCCAGCGACGCCCCGCGAGAGTTACTGTTACCTAACAAGAAGCTATCAGCTTCAGCTGTTCCATTCAACCCGTCATCACCTCCAAGTATCATACGTCCTACTCCCATAGGCATGAACATTGGACCGTCGTGGCCAGTGAACATGACTCTTCATCACGGACCTGGTCCTTTCCCTTCACCTCCTACAACTCCAAACTTGATGCAGCCAATGTCCTTTGTATACCCTCCTCCTTACACTCAATCAGTCCCCACAAGTACCTATCCTGTAACCAGTGGTCCTTTCCATCCCAATCAGTTCCCATGGCCGCATATGTCGGAGTTTGTACCAAGAACGGTTTGGCCCGGATGCCATCCCGTTGAGTTTCCCCCTCCACACATGATCGCTGCCGAGCCAATAGCTTCAACTGTCTTAGAGCCAACTGTCATTCTACCAACTGATATTGACACTTCGGGTGTGGAAGAAGGCAAGCAAGATGTGGCGGCAACCACGGATTCTGTTAATCATGTGAATGCAGTGGCTAGCAGTGAAATGGAGAATGGAACCAAGAAATTTGAGGATGACGAGAAGACTTTTAGCATTTTGTTAAGAGGAAGGAGAAACAGGAAACAGACACTGAGAATGCCGATCAGTTTGCTTAACAGGCCTTATGATTCTCAACCGTTCAAGATTGCTTATAGCAGAGTCATCAGAGGCAGCGAGGCTCCCAAGTCCGCAGCTTGA
Protein:  
MAPKSNRGKTKGDKKKKEEKVLPVMVDVIVNLPDETEAILKGISTDRIIDVRRLLSVNFDTCHVTNYSLSHEVRGSQLKDTVDVSALKPCVLTLTEEDYNEGTAMAHVRRLLDVVACTTCFGPSPEKSDSVKNAQVKGGGKNPKQTETSPPPSPAPKDAVVDEAGETSHSFPKLGSFYEFFSLAHLTPPLQYIRLVAKRETEDIAAEDHLLSVDVKLCNGKLVHVEGCRKGFYSIGKQRIICHNLVDLLRQISRAFDNAYSDLLKAFSERNKFGNLPYGFRANTWLIPPSAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDLVPWANEFAFIASMPCKTAEERQLRDRKVFLLHNLFVDVATFRAIKAVQKVMADPVLAEDSQVLYSETVGDLSVTVTRDTSNASSKVDTKIDGIQATGLDKTKLMERNLLKGLTADENTAAHDVATLGTISLKYCGYISVVKIEKENEKLSPPSQIVDLLEQPEGGANALNINSLRFLLHKSSPEQNKKTHQQQDDELTSSREFVSKMLEESLVKLEEEEIDRDSIMRWELGACWIQHLQDQKNTEKDKKQTNEKSKNELKVEGLGKPLKSLNSNKKKTDASSPKAQQTAVSSQVDTASSEADNAAITATLQSDAEKNAQENVLILKNLLSEAAFTRLQESDTGLHDKSLQELVDLAQKYYTEVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGYVVKLSDKLSHVQSLCVHEMIVRALKHILQAVISAVAADTDKIAAKVATALNMMLGIPKTEAENSWNVHPLIFRWLEKFLKKRYDYDLNAFSYKDLRKFAILRGLCHKVGIELIPRDFDMESPEPFQKTDVVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYHLSVQHEQTTLRILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTPKPDASIASKGHLSVSDLLDFINPSHNAKGKQSVAAKRKSYMKLKEKSNQNVVSEQLTETPRENQKEMSEEETEATGSEDGQSSDANQEAILAPAEEPPSHPVIDEAIMDNSNPTTSAEGSTETQHPDGSEDGWQPVHRPRSAGSYGRRLKQRRASVGKVYTYQKKNVEADNDNPVLQNATQPNATYYVLKKRTASYANYGDHHSPGMTTQGTKFGRKAVKTLAYRVKSTQPSSDNPKTSAETSEEDGLKADASPAVPSGLSSNVQNEAYPKSSVVSLGKSPSYKEVALAPPGSIAKYQVWAPQAEASDKQEEKKSEEGTSVELTRDEQMITVSEKEVKNEISADAESSKPQGKEEIEVELQSSEVEFKGNNLNGNEESGGGIQVEEPVLEDKEGVTDMIHSNTEQEVKDQLAADSDDLKEKLGISATDSSDAPRELLLPNKKLSASAVPFNPSSPPSIIRPTPIGMNIGPSWPVNMTLHHGPGPFPSPPTTPNLMQPMSFVYPPPYTQSVPTSTYPVTSGPFHPNQFPWPHMSEFVPRTVWPGCHPVEFPPPHMIAAEPIASTVLEPTVILPTDIDTSGVEEGKQDVAATTDSVNHVNAVASSEMENGTKKFEDDEKTFSILLRGRRNRKQTLRMPISLLNRPYDSQPFKIAYSRVIRGSEAPKSAA